RECOMB
2006
Springer
14 years 4 months ago
2006
Springer
RECOMB
2006
Springer
14 years 4 months ago
2006
Springer
Advances in tandem mass-spectrometry (MS/MS) steadily increase the rate of generation of MS/MS spectra and make it more computationally challenging to analyze such huge datasets. A...
RECOMB
2006
Springer
14 years 4 months ago
2006
Springer
Abstract. During evolution, genomes are subject to genome rearrangements that alter the ordering and orientation of genes on the chromosomes. If a genome consists of a single chrom...
RECOMB
2006
Springer
14 years 4 months ago
2006
Springer
We study the problem of enumerating substrings that are common amongst genomes that share evolutionary descent. For example, one might want to enumerate all identical (therefore co...
RECOMB
2006
Springer
14 years 4 months ago
2006
Springer
Abstract. There is a resurgence of interest in RNA secondary structure prediction problem (a.k.a. the RNA folding problem) due to the discovery of many new families of non-coding R...
RECOMB
2006
Springer
14 years 4 months ago
2006
Springer
RECOMB
2006
Springer
14 years 4 months ago
2006
Springer
Prokaryotic organisms share genetic material across species boundaries by means of a process known as horizontal gene transfer (HGT). Detecting this process bears great significanc...
RECOMB
2006
Springer
14 years 4 months ago
2006
Springer
Homology identification is the first step for many genomic studies. Current methods, based on sequence comparison, can result in a substantial number of mis-assignments due to the ...
RECOMB
2006
Springer
14 years 4 months ago
2006
Springer
Abstract. The understanding of genome rearrangements is an important endeavor in comparative genomics. A major computational problem in this field is finding a shortest sequence of...
RECOMB
2006
Springer
14 years 4 months ago
2006
Springer
Abstract. Given a phylogenetic tree T for a family of tandemly repeated genes and their signed order O on the chromosome, we aim to find the minimum number of inversions compatible...