Sciweavers

IDA
2008
Springer
13 years 4 months ago
ExpertDiscovery system application for the hierarchical analysis of eukaryotic transcription regulatory regions based on DNA cod
We developed Relational Data Mining approach which allows to overcome essential limitations of the Data Mining and Knowledge Discovery techniques. In the paper the approach was im...
I. V. Khomicheva, Eugenii E. Vityaev, Elena A. Ana...
NAR
2002
89views more  NAR 2002»
13 years 4 months ago
Transcription Regulatory Regions Database (TRRD): its status in 2002
Transcription Regulatory Regions Database (TRRD) is an informational resource containing an integrated description of the gene transcription regulation. An entry of the database c...
Nikolay A. Kolchanov, Elena V. Ignatieva, Elena A....
NAR
2000
104views more  NAR 2000»
13 years 4 months ago
Transcription Regulatory Regions Database (TRRD): its status in 2000
Transcription Regulatory Regions Database (TRRD) has been developed for accumulation of experimental information on the structure
Nikolay A. Kolchanov, Olga A. Podkolodnaya, Elena ...
BMCBI
2004
130views more  BMCBI 2004»
13 years 4 months ago
PATTERNFINDER: combined analysis of DNA regulatory sequences and double-helix stability
Background: Regulatory regions that function in DNA replication and gene transcription contain specific sequences that bind proteins as well as less-specific sequences in which th...
Yanlin Huang, David Kowalski
BMCBI
2007
149views more  BMCBI 2007»
13 years 5 months ago
Identification of tissue-specific cis-regulatory modules based on interactions between transcription factors
Background: Evolutionary conservation has been used successfully to help identify cis-acting DNA regions that are important in regulating tissue-specific gene expression. Motivate...
Xueping Yu, Jimmy J. Lin, Donald J. Zack, Jiang Qi...
ESANN
2008
13 years 6 months ago
Discrimination of regulatory DNA by SVM on the basis of over- and under-represented motifs
In this paper we apply three pattern recognition methods (support vector machine, cluster analysis and principal component analysis) to distinguish regulatory regions from coding a...
Rene te Boekhorst, Irina I. Abnizova, Lorenz Werni...
IPPS
2003
IEEE
13 years 10 months ago
Parallel Detection of Regulatory Elements with gMP
The detection of regulatory elements from a large set of regulatory regions is a challenging problem in computational genomics. However, computational methods to extract this biol...
Bertil Schmidt, Lin Feng, Amey V. Laud, Yusdi Sant...