BMCBI
2004
13 years 4 months ago
2004
Background: Kernel-based learning algorithms are among the most advanced machine learning methods and have been successfully applied to a variety of sequence classification tasks ...
BMCBI
2004
13 years 4 months ago
2004
Background: Regulatory regions that function in DNA replication and gene transcription contain specific sequences that bind proteins as well as less-specific sequences in which th...
BMCBI
2004
13 years 4 months ago
2004
Background: Annotation of sequences that share little similarity to sequences of known function remains a major obstacle in genome annotation. Some of the best methods of detectin...
BMCBI
2004
13 years 4 months ago
2004
Background: Transposable elements (TE) are mobile genetic entities present in nearly all genomes. Previous work has shown that TEs tend to have a different nucleotide composition ...
JC
2007
13 years 4 months ago
2007
Extensible lattice sequences have been proposed and studied in [5–7]. For the special case of extensible Korobov sequences, parameters can be found in [6]. The searches made to ...
BMCBI
2005
13 years 4 months ago
2005
Background: Genomic sequence data cannot be fully appreciated in isolation. Comparative genomics
BMCBI
2005
13 years 4 months ago
2005
Background: The allele frequencies of single-nucleotide polymorphisms (SNPs) are needed to select an optimal subset of common SNPs for use in association studies. Sequence-based m...
BMCBI
2005
13 years 4 months ago
2005
Background: Whole-genome sequencing projects are rapidly producing an enormous number of new sequences. Consequently almost every family of proteins now contains hundreds of membe...
BMCBI
2005
13 years 4 months ago
2005
Background: Several problems exist with current methods used to align DNA sequences for comparative sequence analysis. Most dynamic programming algorithms assume that conserved se...
BMCBI
2005
13 years 4 months ago
2005
Background: During the last few years, DNA sequence analysis has become one of the primary means of taxonomic identification of species, particularly so for species that are minut...