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RSCTC
2010
Springer
155views Fuzzy Logic» more  RSCTC 2010»
9 years 1 months ago
A Fast Randomisation Test for Rule Significance
Randomisation is a method to test the statistical significance of a symbolic rule; it is, however, very expensive. In this paper we present a sequential randomisation test which d...
Ivo Düntsch, Günther Gediga
SYNTHESE
2008
84views more  SYNTHESE 2008»
9 years 3 months ago
How experimental algorithmics can benefit from Mayo's extensions to Neyman-Pearson theory of testing
Although theoretical results for several algorithms in many application domains were presented during the last decades, not all algorithms can be analyzed fully theoretically. Exp...
Thomas Bartz-Beielstein
BMCBI
2006
82views more  BMCBI 2006»
9 years 4 months ago
A method for computing the overall statistical significance of a treatment effect among a group of genes
Background: In studies that use DNA arrays to assess changes in gene expression, our goal is to evaluate the statistical significance of treatments on sets of genes. Genes can be ...
Robert R. Delongchamp, Taewon Lee, Cruz Velasco
BMCBI
2008
103views more  BMCBI 2008»
9 years 4 months ago
Discovering multi-level structures in bio-molecular data through the Bernstein inequality
Background: The unsupervised discovery of structures (i.e. clusterings) underlying data is a central issue in several branches of bioinformatics. Methods based on the concept of s...
Alberto Bertoni, Giorgio Valentini
BMCBI
2007
99views more  BMCBI 2007»
9 years 4 months ago
Statistical significance of cis-regulatory modules
Background: It is becoming increasingly important for researchers to be able to scan through large genomic regions for transcription factor binding sites or clusters of binding si...
Dustin E. Schones, Andrew D. Smith, Michael Q. Zha...
BMCBI
2007
105views more  BMCBI 2007»
9 years 4 months ago
Generating confidence intervals on biological networks
Background: In the analysis of networks we frequently require the statistical significance of some network statistic, such as measures of similarity for the properties of interact...
Thomas Thorne, Michael P. H. Stumpf
BMCBI
2010
110views more  BMCBI 2010»
9 years 4 months ago
On the use of resampling tests for evaluating statistical significance of binding-site co-occurrence
Background: In eukaryotes, most DNA-binding proteins exert their action as members of large effector complexes. The presence of these complexes are revealed in high-throughput gen...
David S. Huen, Steven Russell
HPDC
2010
IEEE
9 years 5 months ago
MPIPairwiseStatSig: parallel pairwise statistical significance estimation of local sequence alignment
Sequence comparison is considered as a cornerstone application in bioinformatics, which forms the basis of many other applications. In particular, pairwise sequence alignment is a...
Ankit Agrawal, Sanchit Misra, Daniel Honbo, Alok N...
COLING
1996
9 years 5 months ago
Towards a More Careful Evaluation of Broad Coverage Parsing Systems
Since treebanks have become available to researchers a wide variety of techniques has been used to make broad coverage parsing systems. This makes quantitative evaluation very imp...
Wide R. Hogenhout, Yuji Matsumoto
CIKM
2008
Springer
9 years 6 months ago
Pairwise statistical significance of local sequence alignment using multiple parameter sets
Background: Accurate estimation of statistical significance of a pairwise alignment is an important problem in sequence comparison. Recently, a comparative study of pairwise stati...
Ankit Agrawal, Xiaoqiu Huang
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