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STRINGOLOGY
2004
13 years 6 months ago
Conditional Inequalities and the Shortest Common Superstring Problem
We investigate the shortest common superstring problem (SCSSP). As SCSSP is APX-complete it cannot be approximated within an arbitrarily small performance ratio. One heuristic tha...
Uli Laube, Maik Weinard
STRINGOLOGY
2004
13 years 6 months ago
A First Approach to Finding Common Motifs With Gaps
Costas S. Iliopoulos, James A. M. McHugh, Pierre P...
STRINGOLOGY
2004
13 years 6 months ago
A Note on Bit-Parallel Alignment Computation
Abstract. The edit distance between strings A and B is defined as the minimum number of edit operations needed in converting A into B or vice versa. Typically the allowed edit oper...
Heikki Hyyrö
STRINGOLOGY
2004
13 years 6 months ago
Sorting suffixes of two-pattern strings
Recently, several authors presented linear recursive algorithms for sorting suffixes of a string. All these algorithms employ a similar three-step approach, based on an initial di...
Frantisek Franek, William F. Smyth
STRINGOLOGY
2004
13 years 6 months ago
BDD-Based Analysis of Gapped q-Gram Filters
Recently, there has been a surge of interest in gapped q-gram filters for approximate string matching. Important design parameters for filters are for example the value of q, the f...
Marc Fontaine, Stefan Burkhardt, Juha Kärkk&a...