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PVLDB
2010
128views more  PVLDB 2010»
8 years 5 months ago
Searching Workflows with Hierarchical Views
Workflows are prevalent in diverse applications, which can be scientific experiments, business processes, web services, or recipes. With the dramatically growing number of workflo...
Ziyang Liu, Qihong Shao, Yi Chen
BMCBI
2011
8 years 5 months ago
A lightweight, flow-based toolkit for parallel and distributed bioinformatics pipelines
Background: Bioinformatic analyses typically proceed as chains of data-processing tasks. A pipeline, or ‘workflow’, is a well-defined protocol, with a specific structure defin...
Marcin Cieslik, Cameron Mura
ACIIDS
2011
IEEE
209views Database» more  ACIIDS 2011»
8 years 5 months ago
Prototype of Object-Oriented Declarative Workflows
While in the traditional workflow processes the control flow is determined statically within process definitions, in declarative workflow processes the control flow is dynamic and ...
Marcin Dabrowski, Michal Drabik, Mariusz Trzaska, ...
IJITWE
2010
118views more  IJITWE 2010»
8 years 7 months ago
Critical Path Based Approach for Predicting Temporal Exceptions in Resource Constrained Concurrent Workflows
Departmental workflows within a digital business ecosystem are often executed concurrently and required to share limited number of resources. However, unexpected events from the b...
Iok-Fai Leong, Yain-Whar Si, Robert P. Biuk-Aghai
BMCBI
2010
133views more  BMCBI 2010»
8 years 7 months ago
Initial steps towards a production platform for DNA sequence analysis on the grid
Background: Bioinformatics is confronted with a new data explosion due to the availability of high throughput DNA sequencers. Data storage and analysis becomes a problem on local ...
Angela C. M. Luyf, Barbera D. C. van Schaik, Miche...
BMCBI
2010
126views more  BMCBI 2010»
8 years 7 months ago
Systematic integration of experimental data and models in systems biology
Background: The behaviour of biological systems can be deduced from their mathematical models. However, multiple sources of data in diverse forms are required in the construction ...
Peter Li, Joseph O. Dada, Daniel Jameson, Irena Sp...
IEEESCC
2009
IEEE
8 years 8 months ago
Theoretical Framework for Eliminating Redundancy in Workflows
In this paper we look at combining and compressing a set of workflows, such that computation can be minimized. In this context, we look at two novel theoretical problems with appl...
Dhrubajyoti Saha, Abhishek Samanta, Smruti R. Sara...
ICWS
2009
IEEE
8 years 8 months ago
A Dynamic Approach toward QoS-Aware Service Workflow Composition
Web service-based workflow management systems have garnered considerable attention for automating and scheduling dependent operations. Such systems often support user preferences,...
David Chiu, Sagar Deshpande, Gagan Agrawal, Rongxi...
ICWS
2009
IEEE
8 years 8 months ago
A MapReduce-Enabled Scientific Workflow Composition Framework
MapReduce has recently gained a lot of attention as a parallel programming model for scalable data-intensive business and scientific analysis. In order to benefit from this powerf...
Xubo Fei, Shiyong Lu, Cui Lin
GI
2009
Springer
8 years 8 months ago
A Static Analysis Technique to Detect Unsatisfiable Conditions in Ontology-based Workflows
: Static analysis techniques for consistency checking of workflows allow to avoid runtime errors. This is in particular crucial for long running workflows where errors, detected la...
Gabriele Weiler, Arnd Poetzsch-Heffter, Stephan Ki...
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