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BMCBI
2007
102views more  BMCBI 2007»
14 years 11 months ago
A comprehensive system for evaluation of remote sequence similarity detection
Background: Accurate and sensitive performance evaluation is crucial for both effective development of better structure prediction methods based on sequence similarity, and for th...
Yuan Qi, Ruslan Sadreyev, Yong Wang, Bong-Hyun Kim...
BIOINFORMATICS
2011
14 years 6 months ago
Integrative network alignment reveals large regions of global network similarity in yeast and human
Motivation: High-throughput methods for detecting molecular interactions have produced large sets of biological network data with much more yet to come. Analogous to sequence alig...
Oleksii Kuchaiev, Natasa Przulj
RECOMB
2006
Springer
15 years 12 months ago
Detecting the Dependent Evolution of Biosequences
Abstract. A probabilistic graphical model is developed in order to detect the dependent evolution between different sites in biological sequences. Given a multiple sequence alignme...
Jeremy Darot, Chen-Hsiang Yeang, David Haussler
BIBE
2010
IEEE
181views Bioinformatics» more  BIBE 2010»
15 years 24 days ago
Multi Level Clustering of Phylogenetic Profiles
The prediction of gene function from genome sequences is one of the main issues in Bioinformatics. Most computational approaches are based on the similarity between sequences to in...
Fotis E. Psomopoulos, Pericles A. Mitkas
CEC
2010
IEEE
15 years 24 days ago
A parallel framework for multi-objective evolutionary optimization
This work focuses on the development of a parallel framework method to improve the effectiveness and the efficiency of the obtained solutions by Multi-objective Evolutionary Algori...
Dipankar Dasgupta, David Camilo Becerra Romero, Al...