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GECCO
2010
Springer
155views Optimization» more  GECCO 2010»
15 years 10 months ago
Negative selection algorithms without generating detectors
Negative selection algorithms are immune-inspired classifiers that are trained on negative examples only. Classification is performed by generating detectors that match none of ...
Maciej Liskiewicz, Johannes Textor
RECOMB
1997
Springer
15 years 9 months ago
A branch-and-cut algorithm for multiple sequence alignment
Multiple sequence alignment is an important problem in computational biology. We study the Maximum Trace formulation introduced by Kececioglu [?]. We first phrase the problem in ...
Knut Reinert, Hans-Peter Lenhof, Petra Mutzel, Kur...
JCB
2006
115views more  JCB 2006»
15 years 5 months ago
Designing an A* Algorithm for Calculating Edit Distance between Rooted-Unordered Trees
Tree structures are useful for describing and analyzing biological objects and processes. Consequently, there is a need to design metrics and algorithms to compare trees. A natura...
Yair Horesh, Ramit Mehr, Ron Unger
SODA
2010
ACM
149views Algorithms» more  SODA 2010»
16 years 2 months ago
Sharp kernel clustering algorithms and their associated Grothendieck inequalities
abstract Subhash Khot Assaf Naor In the kernel clustering problem we are given a (large) n ? n symmetric positive semidefinite matrix A = (aij) with n i=1 n j=1 aij = 0 and a (sma...
Subhash Khot, Assaf Naor
SPAA
2003
ACM
15 years 10 months ago
A practical algorithm for constructing oblivious routing schemes
In a (randomized) oblivious routing scheme the path chosen for a request between a source s and a target t is independent from the current traffic in the network. Hence, such a sc...
Marcin Bienkowski, Miroslaw Korzeniowski, Harald R...