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JCDL
2004
ACM
103views Education» more  JCDL 2004»
15 years 5 months ago
Integration of biomedical text and sequence OAI repositories
Archived biomedical literature and sequence data are growing rapidly. The Open Archives Initiative's Protocol for Metadata Harvesting (OAI-PMH) [1] provides a convenient way ...
Yueyu Fu, Javed Mostafa
BMCBI
2010
129views more  BMCBI 2010»
14 years 12 months ago
LAITOR - Literature Assistant for Identification of Terms co-Occurrences and Relationships
Background: Biological knowledge is represented in scientific literature that often describes the function of genes/ proteins (bioentities) in terms of their interactions (biointe...
Adriano Barbosa-Silva, Theodoros G. Soldatos, Ivan...
WWW
2007
ACM
16 years 14 days ago
Tag clouds for summarizing web search results
In this paper, we describe an application, PubCloud that uses tag clouds for the summarization of results from queries over the PubMed database of biomedical literature. PubCloud ...
Benjamin M. Good, Byron Yu-Lin Kuo, Mark D. Wilkin...
BMCBI
2010
110views more  BMCBI 2010»
14 years 12 months ago
Concept-based query expansion for retrieving gene related publications from MEDLINE
Background: Advances in biotechnology and in high-throughput methods for gene analysis have contributed to an exponential increase in the number of scientific publications in thes...
Sérgio Matos, Joel Arrais, João Maia...
BMCBI
2010
175views more  BMCBI 2010»
14 years 12 months ago
Saliva Ontology: An ontology-based framework for a Salivaomics Knowledge Base
Background: The Salivaomics Knowledge Base (SKB) is designed to serve as a computational infrastructure that can permit global exploration and utilization of data and information ...
Jiye Ai, Barry Smith, Wong T. David