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BMCBI
2008
149views more  BMCBI 2008»
14 years 12 months ago
All-paths graph kernel for protein-protein interaction extraction with evaluation of cross-corpus learning
Background: Automated extraction of protein-protein interactions (PPI) is an important and widely studied task in biomedical text mining. We propose a graph kernel based approach ...
Antti Airola, Sampo Pyysalo, Jari Björne, Tap...
APBC
2004
15 years 1 months ago
PathwayFinder: Paving the Way Towards Automatic Pathway Extraction
Automatically mining protein pathway information from the vast amount of published literature has been an increasing need from the pharmaceutical industry and biomedical research ...
Daming Yao, Jingbo Wang, Yanmei Lu, Nathan Noble, ...
KES
2005
Springer
15 years 5 months ago
gProt: Annotating Protein Interactions Using Google and Gene Ontology
With the increasing amount of biomedical literature, there is a need for automatic extraction of information to support biomedical researchers. Due to incomplete biomedical informa...
Rune Sætre, Amund Tveit, Martin Thorsen Rana...
BMCBI
2008
150views more  BMCBI 2008»
14 years 12 months ago
BibGlimpse: The case for a light-weight reprint manager in distributed literature research
Background: While text-mining and distributed annotation systems both aim at capturing knowledge and presenting it in a standardized form, there have been few attempts to investig...
Thomas Tüchler, Golda Velez, Alexandra Graf, ...
BMCBI
2010
104views more  BMCBI 2010»
14 years 12 months ago
A method for automatically extracting infectious disease-related primers and probes from the literature
Background: Primer and probe sequences are the main components of nucleic acid-based detection systems. Biologists use primers and probes for different tasks, some related to the ...
Miguel García-Remesal, Alejandro Cuevas, Vi...