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» Clustering cancer gene expression data: a comparative study
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BMCBI
2006
155views more  BMCBI 2006»
14 years 11 months ago
AffyMiner: mining differentially expressed genes and biological knowledge in GeneChip microarray data
Background: DNA microarrays are a powerful tool for monitoring the expression of tens of thousands of genes simultaneously. With the advance of microarray technology, the challeng...
Guoqing Lu, The V. Nguyen, Yuannan Xia, Michael Fr...
GECCO
2006
Springer
152views Optimization» more  GECCO 2006»
15 years 3 months ago
Using genetic programming to classify node positive patients in bladder cancer
Nodal staging has been identified as an independent indicator of prognosis. Quantitative RT-PCR data was taken for 70 genes associated with bladder cancer and genetic programming ...
Arpit A. Almal, Anirban P. Mitra, Ram H. Datar, Pe...
BMCBI
2006
126views more  BMCBI 2006»
14 years 11 months ago
Effect of data normalization on fuzzy clustering of DNA microarray data
Background: Microarray technology has made it possible to simultaneously measure the expression levels of large numbers of genes in a short time. Gene expression data is informati...
Seo Young Kim, Jae Won Lee, Jong Sung Bae
BMCBI
2008
169views more  BMCBI 2008»
14 years 11 months ago
A comprehensive comparison of random forests and support vector machines for microarray-based cancer classification
Background: Cancer diagnosis and clinical outcome prediction are among the most important emerging applications of gene expression microarray technology with several molecular sig...
Alexander R. Statnikov, Lily Wang, Constantin F. A...
BMCBI
2010
104views more  BMCBI 2010»
14 years 11 months ago
Response network analysis of differential gene expression in human epithelial lung cells during avian influenza infections
Background: The recent emergence of the H5N1 influenza virus from avian reservoirs has raised concern about future influenza strains of high virulence emerging that could easily i...
Ken Tatebe, Ahmet Zeytun, Ruy M. Ribeiro, Robert H...