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» Efficient protein alignment algorithm for protein search
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GECCO
2010
Springer
189views Optimization» more  GECCO 2010»
14 years 9 months ago
Multiobjective evolutionary algorithm for software project portfolio optimization
Large software companies have to plan their project portfolio to maximize potential portfolio return and strategic alignment, while balancing various preferences, and considering ...
Thomas Kremmel, Jirí Kubalík, Stefan...
CVPR
2010
IEEE
1413views Computer Vision» more  CVPR 2010»
15 years 8 months ago
Free-Shape Subwindow Search for Object Localization
Object localization in an image is usually handled by searching for an optimal subwindow that tightly covers the object of interest. However, the subwindows considered in previous ...
Zhiqi Zhang, Yu Cao, Dhaval Salvi, Kenton Oliver, ...
ISCAS
2005
IEEE
129views Hardware» more  ISCAS 2005»
15 years 5 months ago
A reconfigurable architecture for scanning biosequence databases
—Unknown protein sequences are often compared to a set of known sequences (a database scan) to detect functional similarities. Even though efficient dynamic programming algorithm...
Timothy F. Oliver, Bertil Schmidt, Douglas L. Mask...
BMCBI
2008
103views more  BMCBI 2008»
14 years 11 months ago
Parameter estimation for robust HMM analysis of ChIP-chip data
Background: Tiling arrays are an important tool for the study of transcriptional activity, proteinDNA interactions and chromatin structure on a genome-wide scale at high resolutio...
Peter Humburg, David Bulger, Glenn Stone
ALMOB
2006
80views more  ALMOB 2006»
14 years 11 months ago
Effective p-value computations using Finite Markov Chain Imbedding (FMCI): application to local score and to pattern statistics
The technique of Finite Markov Chain Imbedding (FMCI) is a classical approach to complex combinatorial problems related to sequences. In order to get efficient algorithms, it is k...
Grégory Nuel