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GFKL
2005
Springer
141views Data Mining» more  GFKL 2005»
15 years 5 months ago
On External Indices for Mixtures: Validating Mixtures of Genes
Mixture models represent results of gene expression cluster analysis in a more natural way than ’hard’ partitions. This is also true for the representation of gene labels, such...
Ivan G. Costa, Alexander Schliep
ICASSP
2009
IEEE
15 years 6 months ago
Microarray classification using block diagonal linear discriminant analysis with embedded feature selection
In this paper, block diagonal linear discriminant analysis (BDLDA) is improved and applied to gene expression data. BDLDA is a classification tool with embedded feature selection...
Lingyan Sheng, Roger Pique-Regi, Shahab Asgharzade...
NAR
2011
188views Computer Vision» more  NAR 2011»
14 years 2 months ago
The Gene Expression Barcode: leveraging public data repositories to begin cataloging the human and murine transcriptomes
Various databases have harnessed the wealth of publicly available microarray data to address biological questions ranging from across-tissue differential expression to homologous ...
Matthew N. McCall, Karan Uppal, Harris A. Jaffee, ...
BIODATAMINING
2008
178views more  BIODATAMINING 2008»
14 years 12 months ago
Clustering-based approaches to SAGE data mining
Serial analysis of gene expression (SAGE) is one of the most powerful tools for global gene expression profiling. It has led to several biological discoveries and biomedical appli...
Haiying Wang, Huiru Zheng, Francisco Azuaje
RECOMB
2006
Springer
16 years 3 days ago
Identification and Evaluation of Functional Modules in Gene Co-expression Networks
Abstract. Identifying gene functional modules is an important step towards elucidating gene functions at a global scale. In this paper, we introduce a simple method to construct ge...
Jianhua Ruan, Weixiong Zhang