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ALMOB
2006
138views more  ALMOB 2006»
14 years 12 months ago
A combinatorial optimization approach for diverse motif finding applications
Background: Discovering approximately repeated patterns, or motifs, in biological sequences is an important and widely-studied problem in computational molecular biology. Most fre...
Elena Zaslavsky, Mona Singh
ISI
2007
Springer
15 years 6 months ago
An LDA-based Community Structure Discovery Approach for Large-Scale Social Networks
Abstract— Community discovery has drawn significant research interests among researchers from many disciplines for its increasing application in multiple, disparate areas, inclu...
Haizheng Zhang, Baojun Qiu, C. Lee Giles, Henry C....
BMCBI
2010
114views more  BMCBI 2010»
14 years 12 months ago
Detection of gene orthology from gene co-expression and protein interaction networks
Background: Ortholog detection methods present a powerful approach for finding genes that participate in similar biological processes across different organisms, extending our und...
Fadi Towfic, Susan VanderPlas, Casey A. Oliver, Ol...
CONEXT
2007
ACM
15 years 3 months ago
Rethinking internet traffic management: from multiple decompositions to a practical protocol
In the Internet today, traffic management spans congestion control (at end hosts), routing protocols (on routers), and traffic engineering (by network operators). Historically, th...
Jiayue He, Martin Suchara, Ma'ayan Bresler, Jennif...
RECOMB
2005
Springer
16 years 2 days ago
Combinatorial Genetic Regulatory Network Analysis Tools for High Throughput Transcriptomic Data
: A series of genome-scale algorithms and high-performance implementations is described and shown to be useful in the genetic analysis of gene transcription. With them it is possib...
Elissa J. Chesler, Michael A. Langston