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» On the Design of Codes for DNA Computing
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AOSD
2011
ACM
14 years 3 months ago
An aspect-oriented approach for implementing evolutionary computation applications
Object-oriented frameworks support design and code reuse for specific application domains. To facilitate the development of evolutionary computation (EC) programs, such as geneti...
Andres J. Ramirez, Adam C. Jensen, Betty H. C. Che...
PASTE
2004
ACM
15 years 5 months ago
The design and implementation of FIT: a flexible instrumentation toolkit
This paper presents FIT, a Flexible open-source binary code Instrumentation Toolkit. Unlike existing tools, FIT is truly portable, with existing backends for the Alpha, x86 and AR...
Bruno De Bus, Dominique Chanet, Bjorn De Sutter, L...
BMCBI
2008
204views more  BMCBI 2008»
14 years 12 months ago
EST2uni: an open, parallel tool for automated EST analysis and database creation, with a data mining web interface and microarra
Background: Expressed sequence tag (EST) collections are composed of a high number of single-pass, redundant, partial sequences, which need to be processed, clustered, and annotat...
Javier Forment, Francisco Gilabert Villamón...
CODES
2007
IEEE
15 years 3 months ago
A computational reflection mechanism to support platform debugging in SystemC
System-level and Platform-based design, along with Transaction Level modeling (TLM) techniques and languages like SystemC, appeared as a response to the ever increasing complexity...
Bruno Albertini, Sandro Rigo, Guido Araujo, Cristi...
JCC
2011
87views more  JCC 2011»
14 years 6 months ago
NUPACK: Analysis and design of nucleic acid systems
: The Nucleic Acid Package (NUPACK) is a growing software suite for the analysis and design of nucleic acid systems. The NUPACK web server (http://www.nupack.org) currently enables...
Joseph N. Zadeh, Conrad Steenberg, Justin S. Bois,...