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BMCBI
2007
115views more  BMCBI 2007»
14 years 11 months ago
Recognizing protein-protein interfaces with empirical potentials and reduced amino acid alphabets
Background: In structural genomics, an important goal is the detection and classification of protein–protein interactions, given the structures of the interacting partners. We h...
Guillaume Launay, Raul Mendez, Shoshana J. Wodak, ...
IQIS
2004
ACM
15 years 4 months ago
Utility-based Resolution of Data Inconsistencies
A virtual database system is software that provides unified access to multiple information sources. If the sources are overlapping in their contents and independently maintained,...
Amihai Motro, Philipp Anokhin, Aybar C. Acar
RECOMB
2007
Springer
15 years 11 months ago
Pairwise Global Alignment of Protein Interaction Networks by Matching Neighborhood Topology
We describe an algorithm, IsoRank, for global alignment of two protein-protein interaction (PPI) networks. IsoRank aims to maximize the overall match between the two networks; in c...
Rohit Singh, Jinbo Xu, Bonnie Berger
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BMCBI
2007
119views more  BMCBI 2007»
14 years 11 months ago
Efficacy of different protein descriptors in predicting protein functional families
Background: Sequence-derived structural and physicochemical descriptors have frequently been used in machine learning prediction of protein functional families, thus there is a ne...
Serene A. K. Ong, Hong Huang Lin, Yu Zong Chen, Ze...
IEEEARES
2006
IEEE
15 years 5 months ago
Application of the Digraph Method in System Fault Diagnostics
There is an increasing demand for highly reliable systems in the safety conscious climate of today’s world. When a fault does occur there are two desirable outcomes. Firstly, de...
E. M. Kelly, L. M. Bartlett