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BMCBI
2008
172views more  BMCBI 2008»
15 years 6 months ago
Compo: composite motif discovery using discrete models
Background: Computational discovery of motifs in biomolecular sequences is an established field, with applications both in the discovery of functional sites in proteins and regula...
Geir Kjetil Sandve, Osman Abul, Finn Drablø...
JCB
2006
144views more  JCB 2006»
15 years 6 months ago
Modeling Virus Self-Assembly Pathways: Avoiding Dynamics Using Geometric Constraint Decomposition
We develop a model for elucidating the assembly pathways by which an icosahedral viral shell forms from 60 identical constituent protein monomers. This poorly understood process a...
Meera Sitharam, Mavis Agbandje-Mckenna
SIAMCOMP
1998
96views more  SIAMCOMP 1998»
15 years 5 months ago
Fault-Tolerant Computation in the Full Information Model
We initiate an investigation of general fault-tolerant distributed computation in the full-information model. In the full information model no restrictions are made on the computat...
Oded Goldreich, Shafi Goldwasser, Nathan Linial
INFOCOM
2008
IEEE
16 years 12 days ago
The Inframetric Model for the Internet
—A large amount of algorithms has recently been designed for the Internet under the assumption that the distance defined by the round-trip delay (RTT) is a metric. Moreover, man...
Pierre Fraigniaud, Emmanuelle Lebhar, Laurent Vien...
KBSE
2007
IEEE
16 years 8 days ago
Tools for model-based security engineering: models vs. code
We present tools to support model-based security engineering on both the model and the code level. In the approach supported by these tools, one firstly specifies the securitycr...
Jan Jürjens, Yijun Yu