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ISMB
1998
13 years 6 months ago
A Hidden Markov Model for Predicting Transmembrane Helices in Protein Sequences
A novel method to model and predict the location and orientation of alpha helices in membrane- spanning proteins is presented. It is based on a hidden Markov model (HMM) with an a...
Erik L. L. Sonnhammer, Gunnar von Heijne, Anders K...
ECCV
2004
Springer
14 years 7 months ago
Synthesizing Dynamic Texture with Closed-Loop Linear Dynamic System
Dynamic texture can be defined as a temporally continuous and infinitely varying stream of images that exhibit certain temporal statistics. Linear dynamic system (LDS) represented ...
Lu Yuan, Fang Wen, Ce Liu, Heung-Yeung Shum
CGO
2008
IEEE
13 years 11 months ago
Prediction and trace compression of data access addresses through nested loop recognition
This paper describes an algorithm that takes a trace (i.e., a sequence of numbers or vectors of numbers) as input, and from that produces a sequence of loop nests that, when run, ...
Alain Ketterlin, Philippe Clauss
CC
2008
Springer
193views System Software» more  CC 2008»
13 years 7 months ago
Automatic Transformations for Communication-Minimized Parallelization and Locality Optimization in the Polyhedral Model
The polyhedral model provides powerful abstractions to optimize loop nests with regular accesses. Affine transformations in this model capture a complex sequence of execution-reord...
Uday Bondhugula, Muthu Manikandan Baskaran, Sriram...
LICS
2008
IEEE
13 years 11 months ago
Nonlocal Flow of Control and Kleene Algebra with Tests
Kleene algebra with tests (KAT) is an equational system for program verification that combines Kleene algebra (KA), or the algebra of regular expressions, with Boolean algebra. I...
Dexter Kozen