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BIB
2008
93views more  BIB 2008»
13 years 5 months ago
A structured approach for the engineering of biochemical network models, illustrated for signalling pathways
Quantitative models of biochemical networks (signal transduction cascades, metabolic pathways, gene regulatory circuits) are a central component of modern systems biology. Buildin...
Rainer Breitling, David Gilbert, Monika Heiner, Ri...
BMCBI
2006
126views more  BMCBI 2006»
13 years 5 months ago
A joint model of regulatory and metabolic networks
Background: Gene regulation and metabolic reactions are two primary activities of life. Although many works have been dedicated to study each system, the coupling between them is ...
Chen-Hsiang Yeang, Martin Vingron
CISIS
2009
IEEE
14 years 6 days ago
A Nonmonotonic Logical Approach for Modelling and Revising Metabolic Networks
—This paper describes a new logic-based approach for representing and reasoning about metabolic networks. First it shows how biological pathways can be elegantly represented in a...
Oliver Ray, Ken E. Whelan, Ross D. King
APBC
2004
13 years 6 months ago
Representing Experimental Biological Data in Metabolic Networks
This paper describes a novel approach to representing experimental biological data in metabolic networks. The aim is to allow biologists to visualise and analyse the data in the c...
Tim Dwyer, Hardy Rolletschek, Falk Schreiber
CEC
2010
IEEE
13 years 11 days ago
Parameter estimation with term-wise decomposition in biochemical network GMA models by hybrid regularized Least Squares-Particle
High-throughput analytical techniques such as nuclear magnetic resonance, protein kinase phosphorylation, and mass spectroscopic methods generate time dense profiles of metabolites...
Prospero C. Naval, Luis G. Sison, Eduardo R. Mendo...