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» A Method for Change Computation in Deductive Databases
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BMCBI
2010
151views more  BMCBI 2010»
13 years 5 months ago
Using diffusion distances for flexible molecular shape comparison
Background: Many molecules are flexible and undergo significant shape deformation as part of their function, and yet most existing molecular shape comparison (MSC) methods treat t...
Yu-Shen Liu, Qi Li, Guo-Qin Zheng, Karthik Ramani,...
HIPEAC
2009
Springer
13 years 12 months ago
Collective Optimization
Abstract. Iterative compilation is an efficient approach to optimize programs on rapidly evolving hardware, but it is still only scarcely used in practice due to a necessity to gat...
Grigori Fursin, Olivier Temam
EDBT
2009
ACM
166views Database» more  EDBT 2009»
13 years 9 months ago
Neighbor-based pattern detection for windows over streaming data
The discovery of complex patterns such as clusters, outliers, and associations from huge volumes of streaming data has been recognized as critical for many domains. However, patte...
Di Yang, Elke A. Rundensteiner, Matthew O. Ward
BMCBI
2010
163views more  BMCBI 2010»
13 years 5 months ago
Reduced representation of protein structure: implications on efficiency and scope of detection of structural similarity
Background: Computational comparison of two protein structures is the starting point of many methods that build on existing knowledge, such as structure modeling (including modeli...
Zong Hong Zhang, Hwee Kuan Lee, Ivana Mihalek
BMCBI
2004
131views more  BMCBI 2004»
13 years 4 months ago
Alternative mapping of probes to genes for Affymetrix chips
Background: Short oligonucleotide arrays have several probes measuring the expression level of each target transcript. Therefore the selection of probes is a key component for the...
Laurent Gautier, Morten Møller, Lennart Fri...