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BMCBI
2006
108views more  BMCBI 2006»
13 years 5 months ago
Probe set algorithms: is there a rational best bet?
Affymetrix microarrays have become a standard experimental platform for studies of mRNA expression profiling. Their success is due, in part, to the multiple oligonucleotide featur...
Jinwook Seo, Eric P. Hoffman
TKDE
2010
224views more  TKDE 2010»
13 years 14 days ago
Non-Negative Matrix Factorization for Semisupervised Heterogeneous Data Coclustering
Coclustering heterogeneous data has attracted extensive attention recently due to its high impact on various important applications, such us text mining, image retrieval, and bioin...
Yanhua Chen, Lijun Wang, Ming Dong
EDBT
2010
ACM
135views Database» more  EDBT 2010»
13 years 3 months ago
Querying spatial patterns
Spatial data are common in many scientific and commercial domains such as geographical information systems and gene/protein expression profiles. Querying for distribution patterns...
Vishwakarma Singh, Arnab Bhattacharya, Ambuj K. Si...
EVOW
2006
Springer
13 years 9 months ago
Hierarchical Clustering, Languages and Cancer
In this paper, we introduce a novel objective function for the hierarchical clustering of data from distance matrices, a very relevant task in Bioinformatics. To test the robustnes...
Pritha Mahata, Wagner Costa, Carlos Cotta, Pablo M...
ECCB
2008
IEEE
14 years 7 days ago
Connect the dots: exposing hidden protein family connections from the entire sequence tree
Motivation: Mapping of remote evolutionary links is a classic computational problem of much interest. Relating protein families allows for functional and structural inference on u...
Yaniv Loewenstein, Michal Linial