77 search results - page 1 / 16 » A Parallel, Out-of-Core Algorithm for RNA Secondary Structur... |
JCB
2000
13 years 4 months ago
2000
We present an implementation of McCaskill's algorithm for computing the base pair probabilities of an RNA molecule for massively parallel message passing architectures. The p...
ICPP
2006
IEEE
13 years 11 months ago
2006
IEEE
RNA pseudoknot prediction is an algorithm for RNA sequence search and alignment. An important building block towards pseudoknot prediction is RNA secondary structure prediction. T...
BMCBI
2011
12 years 11 months ago
2011
Background: The prediction of the structure of large RNAs remains a particular challenge in bioinformatics, due to the computational complexity and low levels of accuracy of state...
BIOINFORMATICS
2007
13 years 4 months ago
2007
BMCBI
2010
13 years 4 months ago
2010
Background: To understand an RNA sequence's mechanism of action, the structure must be known. Furthermore, target RNA structure is an important consideration in the design of...