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2000
13 years 6 months ago
A Pragmatic Information Extraction Strategy for Gathering Data on Genetic Interactions
We present in this paper a pragmatic strategy to perform information extraction from biologic texts. Since the emergence of the information extraction field, techniques have evolv...
Denys Proux, François Rechenmann, Laurent J...
ECAI
2000
Springer
13 years 9 months ago
An Ontology Enrichment Method for a Pragmatic Information Extraction System gathering Data on Genetic Interactions
We present in this paper a method to insert new concepts in an existing information extraction system based on a conceptual graph architecture. We use verb patterns as conceptual s...
Claude Roux, Denys Proux, François Rechenma...
GECCO
2010
Springer
191views Optimization» more  GECCO 2010»
13 years 9 months ago
Initialization parameter sweep in ATHENA: optimizing neural networks for detecting gene-gene interactions in the presence of sma
Recent advances in genotyping technology have led to the generation of an enormous quantity of genetic data. Traditional methods of statistical analysis have proved insufficient i...
Emily Rose Holzinger, Carrie C. Buchanan, Scott M....
BMCBI
2010
214views more  BMCBI 2010»
13 years 4 months ago
AutoSOME: a clustering method for identifying gene expression modules without prior knowledge of cluster number
Background: Clustering the information content of large high-dimensional gene expression datasets has widespread application in "omics" biology. Unfortunately, the under...
Aaron M. Newman, James B. Cooper