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    » A Process Calculus for Molecular Interaction Maps
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    CORR
    2009
    Springer
    74views Education» more  CORR 2009»
    A Process Calculus for Molecular Interaction Maps
    13 years 3 months ago
    A Process Calculus for Molecular Interaction Maps
    Download  www.di.unipi.it
    Roberto Barbuti, Andrea Maggiolo-Schettini, Paolo ...
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    ERSHOV
    2009
    Springer
    136views Theoretical Computer Science» more  ERSHOV 2009»
    Simulation of Kohn's Molecular Interaction Maps through Translation into Stochastic CLS+
    14 years 3 days ago
    Simulation of Kohn's Molecular Interaction Maps through Translation into Stochastic CLS+
    Download  www.di.unipi.it
    Kohn’s Molecular Interaction Maps (MIMs) are a graphical notation for describing bioregulatory networks at the molecular level. Even if the meaning of Kohn’s diagrams can be of...
    Roberto Barbuti, Daniela Lepri, Andrea Maggiolo-Sc...
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    BMCBI
    2008
    163views more  BMCBI 2008»
    The Annotation, Mapping, Expression and Network (AMEN) suite of tools for molecular systems biology
    13 years 5 months ago
    The Annotation, Mapping, Expression and Network (AMEN) suite of tools for molecular systems biology
    Download  www.biomedcentral.com
    Background: High-throughput genome biological experiments yield large and multifaceted datasets that require flexible and user-friendly analysis tools to facilitate their interpre...
    Frédéric Chalmel, Michael Primig
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    ASPLOS
    2009
    ACM
    174views Programming Languages» more  ASPLOS 2009»
    GPU acceleration of a production molecular docking code
    14 years 6 months ago
    GPU acceleration of a production molecular docking code
    Download  www.bu.edu
    Abstract: Modeling the interactions of biological molecules, or docking, is critical to both understanding basic life processes and to designing new drugs. Here we describe the GPU...
    Bharat Sukhwani, Martin C. Herbordt
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    CLEIEJ
    2006
    88views more  CLEIEJ 2006»
    A Stochastic Concurrent Constraint Based Framework to Model and Verify Biological Systems
    13 years 5 months ago
    A Stochastic Concurrent Constraint Based Framework to Model and Verify Biological Systems
    Download  www.clei.cl
    Concurrent process calculi are powerful formalisms for modelling concurrent systems. The mathematical style underlying process calculi allow to both model and verify properties of...
    Carlos Olarte, Camilo Rueda
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