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» A Ruby API to query the Ensembl database for genomic feature...
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DILS
2008
Springer
13 years 6 months ago
VisGenome and Ensembl: Usability of Integrated Genome Maps
It is not always clear how best to represent integrated data sets, and which application and database features allow a scientist to take best advantage of data coming from various ...
Joanna Jakubowska, Ela Hunt, John McClure, Matthew...
BMCBI
2010
160views more  BMCBI 2010»
12 years 12 months ago
eHive: An Artificial Intelligence workflow system for genomic analysis
Background: The Ensembl project produces updates to its comparative genomics resources with each of its several releases per year. During each release cycle approximately two week...
Jessica Severin, Kathryn Beal, Albert J. Vilella, ...
BMCBI
2010
112views more  BMCBI 2010»
13 years 5 months ago
TabSQL: a MySQL tool to facilitate mapping user data to public databases
Background: With advances in high-throughput genomics and proteomics, it is challenging for biologists to deal with large data files and to map their data to annotations in public...
Xiaoqin Xia, Michael McClelland, Yipeng Wang
NAR
2011
208views Computer Vision» more  NAR 2011»
12 years 11 months ago
The Pancreatic Expression database: 2011 update
The Pancreatic Expression database (PED, http:// www.pancreasexpression.org) has established itself as the main repository for pancreatic-derived -omics data. For the past 3 years...
Rosalind J. Cutts, Emanuela Gadaleta, Stephan A. H...