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EUROGP
2008
Springer
120views Optimization» more  EUROGP 2008»
13 years 6 months ago
A SIMD Interpreter for Genetic Programming on GPU Graphics Cards
William B. Langdon, Wolfgang Banzhaf
BMCBI
2008
211views more  BMCBI 2008»
13 years 4 months ago
CUDA compatible GPU cards as efficient hardware accelerators for Smith-Waterman sequence alignment
Background: Searching for similarities in protein and DNA databases has become a routine procedure in Molecular Biology. The Smith-Waterman algorithm has been available for more t...
Svetlin Manavski, Giorgio Valle
PCI
2005
Springer
13 years 10 months ago
Initial Experiences Porting a Bioinformatics Application to a Graphics Processor
Bioinformatics applications are one of the most relevant and compute-demanding applications today. While normally these applications are executed on clusters or dedicated parallel ...
Maria Charalambous, Pedro Trancoso, Alexandros Sta...
EUROGP
2007
Springer
175views Optimization» more  EUROGP 2007»
13 years 11 months ago
Fast Genetic Programming on GPUs
As is typical in evolutionary algorithms, fitness evaluation in GP takes the majority of the computational effort. In this paper we demonstrate the use of the Graphics Processing...
Simon Harding, Wolfgang Banzhaf
SOCO
2008
Springer
13 years 4 months ago
GP on SPMD parallel graphics hardware for mega Bioinformatics data mining
Abstract We demonstrate a SIMD C++ genetic programming system on a single 128 node parallel nVidia GeForce 8800 GTX GPU under RapidMind's GPGPU Linux software by predicting te...
William B. Langdon, Andrew P. Harrison