280 search results - page 2 / 56 » A Sequence Alignment Model Based on the Averaged Perceptron |
EMNLP
2007
13 years 6 months ago
2007
We propose a sequence-alignment based method for detecting and disambiguating coordinate conjunctions. In this method, averaged perceptron learning is used to adapt the substituti...
BMCBI
2007
13 years 5 months ago
2007
Background: Multiple sequence alignment is fundamental. Exponential growth in computation time appears to be inevitable when an optimal alignment is required for many sequences. E...
BMCBI
2007
13 years 5 months ago
2007
Background: Accurate sequence alignments are essential for homology searches and for building three-dimensional structural models of proteins. Since structure is better conserved ...
RECOMB
2009
Springer
14 years 5 months ago
2009
Springer
Accurately aligning distant protein sequences is notoriously difficult. A recent approach to improving alignment accuracy is to use additional information such as predicted seconda...
TCBB
2008
13 years 5 months ago
2008
When aligning biological sequences, the choice of scoring scheme is critical. Even small changes in gap penalties, for example, can yield radically different alignments. A rigorous...