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» A Sticker-Based Model for DNA Computation
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JCB
1998
129views more  JCB 1998»
13 years 4 months ago
A Sticker-Based Model for DNA Computation
We introduce a new model of molecular computation that we call the sticker model. Like many previous proposals it makes use of DNA strands as the physical substrate in which infor...
Sam T. Roweis, Erik Winfree, Richard Burgoyne, Nic...
DNA
2001
Springer
13 years 9 months ago
Solving Knapsack Problems in a Sticker Based Model
Mario J. Pérez-Jiménez, Fernando San...
DNA
2007
Springer
106views Bioinformatics» more  DNA 2007»
13 years 9 months ago
Hardware Acceleration for Thermodynamic Constrained DNA Code Generation
Reliable DNA computing requires a large pool of oligonucleotides that do not produce cross-hybridize. In this paper, we present a transformed algorithm to calculate the maximum wei...
Qinru Qiu, Prakash Mukre, Morgan Bishop, Daniel J....
BMCBI
2010
121views more  BMCBI 2010»
13 years 2 months ago
Computing DNA duplex instability profiles efficiently with a two-state model: trends of promoters and binding sites
Background: DNA instability profiles have been used recently for predicting the transcriptional start site and the location of core promoters, and to gain insight into promoter ac...
Miriam R. Kantorovitz, Zoi Rapti, Vladimir Gelev, ...
JACIII
2006
90views more  JACIII 2006»
13 years 5 months ago
Experimentally Constructing Semantic Models Based on DNA Computing
Yusei Tsuboi, Zuwairie Ibrahim, Osamu Ono