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IPPS
2000
IEEE
13 years 9 months ago
A Surface-Based DNA Algorithm for the Expansion of Symbolic Determinants
In the past few years since Adleman’s pioneering work on solving the HPP(Hamiltonian Path Problem) with a DNA-based computer [1], many algorithms have been designed on solving NP...
Zhiquan Frank Qiu, Mi Lu
GCB
2000
Springer
75views Biometrics» more  GCB 2000»
13 years 8 months ago
Regexpcount, a Symbolic Package for Counting Problems on Regular Expressions and Words
In previous work [10], we considered algorithms related to the statistics of matches with words and regular expressions in texts generated by Bernoulli or Markov sources. In this w...
Pierre Nicodème
CCECE
2006
IEEE
13 years 11 months ago
Survey of Biological High Performance Computing: Algorithms, Implementations and Outlook Research
During recent years there has been an explosive growth of biological data coming from genome projects, proteomics, protein structure determination, and the rapid expansion in digi...
Nasreddine Hireche, J. M. Pierre Langlois, Gabriel...
RECOMB
2003
Springer
14 years 5 months ago
Whole-genome comparative annotation and regulatory motif discovery in multiple yeast species
In [13] we reported the genome sequences of S. paradoxus, S. mikatae and S. bayanus and compared these three yeast species to their close relative, S. cerevisiae. Genome-wide comp...
Manolis Kamvysselis, Nick Patterson, Bruce Birren,...
IANDC
2008
141views more  IANDC 2008»
13 years 5 months ago
Graph connectivity, partial words, and a theorem of Fine and Wilf
The problem of computing periods in words, or finite sequences of symbols from a finite alphabet, has important applications in several areas including data compression, string se...
Francine Blanchet-Sadri, Deepak Bal, Gautam Sisodi...