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BMCBI
2011
12 years 11 months ago
PheMaDB: A solution for storage, retrieval, and analysis of high throughput phenotype data
Background: OmniLog™ phenotype microarrays (PMs) have the capability to measure and compare the growth responses of biological samples upon exposure to hundreds of growth condit...
Wenling E. Chang, Keri Sarver, Brandon W. Higgs, T...
BMCBI
2006
374views more  BMCBI 2006»
13 years 5 months ago
AMDA: an R package for the automated microarray data analysis
Background: Microarrays are routinely used to assess mRNA transcript levels on a genome-wide scale. Large amount of microarray datasets are now available in several databases, and...
Mattia Pelizzola, Norman Pavelka, Maria Foti, Paol...
KDD
2009
ACM
198views Data Mining» more  KDD 2009»
14 years 5 months ago
Pervasive parallelism in data mining: dataflow solution to co-clustering large and sparse Netflix data
All Netflix Prize algorithms proposed so far are prohibitively costly for large-scale production systems. In this paper, we describe an efficient dataflow implementation of a coll...
Srivatsava Daruru, Nena M. Marin, Matt Walker, Joy...
BMCBI
2010
223views more  BMCBI 2010»
13 years 9 days ago
MetNetGE: interactive views of biological networks and ontologies
Background: Linking high-throughput experimental data with biological networks is a key step for understanding complex biological systems. Currently, visualization tools for large...
Ming Jia, Suh-Yeon Choi, Dirk Reiners, Eve Syrkin ...
WWW
2005
ACM
14 years 6 months ago
Algorithmic detection of semantic similarity
Automatic extraction of semantic information from text and links in Web pages is key to improving the quality of search results. However, the assessment of automatic semantic meas...
Ana Gabriela Maguitman, Filippo Menczer, Heather R...