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BMCBI
2010
154views more  BMCBI 2010»
13 years 4 months ago
Binary image representation of a ligand binding site: its application to efficient sampling of a conformational ensemble
Background: Modelling the ligand binding site of a protein is an important component of understanding proteinligand interactions and is being actively studied. Even if the side ch...
Edon Sung, Sangsoo Kim, Whanchul Shin
JCB
2008
170views more  JCB 2008»
13 years 4 months ago
Efficiently Identifying Max-Gap Clusters in Pairwise Genome Comparison
The spatial clustering of genes across different genomes has been used to study important problems in comparative genomics, from identification of operons to detection of homologo...
Xu Ling, Xin He, Dong Xin, Jiawei Han
BMCBI
2011
12 years 11 months ago
A Computational Framework for Proteome-Wide Pursuit and Prediction of Metalloproteins using ICP-MS and MS/MS Data
Background: Metal-containing proteins comprise a diverse and sizable category within the proteomes of organisms, ranging from proteins that use metals to catalyze reactions to pro...
W. Andrew Lancaster, Jeremy L. Praissman, Farris L...
KDID
2004
132views Database» more  KDID 2004»
13 years 6 months ago
An Automata Approach to Pattern Collections
Condensed representations of pattern collections have been recognized to be important building blocks of inductive databases, a promising theoretical framework for data mining, and...
Taneli Mielikäinen
HT
2005
ACM
13 years 10 months ago
As we may perceive: inferring logical documents from hypertext
In recent years, many algorithms for the Web have been developed that work with information units distinct from individual web pages. These include segments of web pages or aggreg...
Pavel Dmitriev, Carl Lagoze, Boris Suchkov