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» A fisheye viewer for microarray-based gene expression data
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BMCBI
2006
81views more  BMCBI 2006»
13 years 5 months ago
A fisheye viewer for microarray-based gene expression data
Background: Microarray has been widely used to measure the relative amounts of every mRNA transcript from the genome in a single scan. Biologists have been accustomed to reading t...
Min Wu, Cheng Thao, Xiangming Mu, Ethan V. Munson
BMCBI
2007
115views more  BMCBI 2007»
13 years 5 months ago
SpliceMiner: a high-throughput database implementation of the NCBI Evidence Viewer for microarray splice variant analysis
Background: There are many fewer genes in the human genome than there are expressed transcripts. Alternative splicing is the reason. Alternatively spliced transcripts are often sp...
Ari B. Kahn, Michael C. Ryan, Hongfang Liu, Barry ...
BIOINFORMATICS
2008
203views more  BIOINFORMATICS 2008»
13 years 5 months ago
The SGN comparative map viewer
Background: A common approach to understanding the genetic basis of complex traits is through identification of associated quantitative trait loci (QTL). Fine mapping QTLs require...
Lukas A. Mueller, Adri A. Mills, Beth Skwarecki, R...
IJBRA
2007
97views more  IJBRA 2007»
13 years 5 months ago
Structural Risk Minimisation based gene expression profiling analysis
: For microarray based cancer classification, feature selection is a common method for improving classifier generalisation. Most wrapper methods use cross validation methods to eva...
Xue-wen Chen, Byron Gerlach, Dechang Chen, ZhenQiu...
BMCBI
2005
157views more  BMCBI 2005»
13 years 5 months ago
Statistical Viewer: a tool to upload and integrate linkage and association data as plots displayed within the Ensembl genome bro
Background: To facilitate efficient selection and the prioritization of candidate complex disease susceptibility genes for association analysis, increasingly comprehensive annotat...
Judith E. Stenger, Hong Xu, Carol Haynes, Elizabet...