95 search results - page 1 / 19 » A more efficient algorithm for perfect sorting by reversals |
IPL
2008
13 years 4 months ago
2008
We describe a new algorithm for the problem of perfect sorting a signed permutation by reversals. The worst-case time complexity of this algorithm is parameterized by the maximum p...
CPM
2009
Springer
13 years 11 months ago
2009
Springer
A sequence of reversals that takes a signed permutation to the identity is perfect if it preserves all common intervals between the permutation and the identity. The problem of com...
WABI
2005
Springer
13 years 10 months ago
2005
Springer
—We propose new algorithms for computing pairwise rearrangement scenarios that conserve the combinatorial structure of genomes. More precisely, we investigate the problem of sort...
COCOON
2005
Springer
13 years 10 months ago
2005
Springer
In computational biology, gene order data is often modelled as signed permutations. A classical problem in genome comparison is to detect conserved segments in a permutation, that ...
JCB
2007
13 years 4 months ago
2007
The understanding of genome rearrangements is an important endeavor in comparative genomics. A major computational problem in this field is finding a shortest sequence of genome...