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ISPD
1998
ACM
111views Hardware» more  ISPD 1998»
13 years 8 months ago
A pattern matching algorithm for verification and analysis of very large IC layouts
We propose a simple, isometry invariant pattern matching algorithm for an effective data reduction useful in layout-related data processing of very complex IC designs. The repeata...
Mariusz Niewczas, Wojciech Maly, Andrzej J. Strojw...
ICS
2005
Tsinghua U.
13 years 10 months ago
Disk layout optimization for reducing energy consumption
Excessive power consumption is becoming a major barrier to extracting the maximum performance from high-performance parallel systems. Therefore, techniques oriented towards reduci...
Seung Woo Son, Guangyu Chen, Mahmut T. Kandemir
JSS
2007
120views more  JSS 2007»
13 years 4 months ago
The design and evaluation of path matching schemes on compressed control flow traces
A control flow trace captures the complete sequence of dynamically executed basic blocks and function calls. It is usually of very large size and therefore commonly stored in com...
Yongjing Lin, Youtao Zhang, Rajiv Gupta
CIKM
2005
Springer
13 years 10 months ago
Exact match search in sequence data using suffix trees
We study suitable indexing techniques to support efficient exact match search in large biological sequence databases. We propose a suffix tree (ST) representation, called STA-DF, ...
Mihail Halachev, Nematollaah Shiri, Anand Thamildu...
BMCBI
2004
208views more  BMCBI 2004»
13 years 4 months ago
Using 3D Hidden Markov Models that explicitly represent spatial coordinates to model and compare protein structures
Background: Hidden Markov Models (HMMs) have proven very useful in computational biology for such applications as sequence pattern matching, gene-finding, and structure prediction...
Vadim Alexandrov, Mark Gerstein