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» A rank sum test method for informative gene discovery
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BMCBI
2005
121views more  BMCBI 2005»
13 years 5 months ago
Comparison of seven methods for producing Affymetrix expression scores based on False Discovery Rates in disease profiling data
Background: A critical step in processing oligonucleotide microarray data is combining the information in multiple probes to produce a single number that best captures the express...
Kerby Shedden, Wei Chen, Rork Kuick, Debashis Ghos...
TREC
2003
13 years 6 months ago
Ranking Function Discovery by Genetic Programming for Robust Retrieval
Ranking functions are instrumental for the success of an information retrieval (search engine) system. However nearly all existing ranking functions are manually designed based on...
Li Wang, Weiguo Fan, Rui Yang, Wensi Xi, Ming Luo,...
BMCBI
2005
118views more  BMCBI 2005»
13 years 5 months ago
Feature selection and classification for microarray data analysis: Evolutionary methods for identifying predictive genes
Background: In the clinical context, samples assayed by microarray are often classified by cell line or tumour type and it is of interest to discover a set of genes that can be us...
Thanyaluk Jirapech-Umpai, J. Stuart Aitken
CSB
2004
IEEE
135views Bioinformatics» more  CSB 2004»
13 years 9 months ago
Selection of Patient Samples and Genes for Outcome Prediction
Gene expression profiles with clinical outcome data enable monitoring of disease progression and prediction of patient survival at the molecular level. We present a new computatio...
Huiqing Liu, Jinyan Li, Limsoon Wong
BMCBI
2004
113views more  BMCBI 2004»
13 years 5 months ago
Leveraging two-way probe-level block design for identifying differential gene expression with high-density oligonucleotide array
Background: To identify differentially expressed genes across experimental conditions in oligonucleotide microarray experiments, existing statistical methods commonly use a summar...
Leah Barrera, Chris Benner, Yong-Chuan Tao, Elizab...