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BMCBI
2006
115views more  BMCBI 2006»
13 years 5 months ago
The accuracy of several multiple sequence alignment programs for proteins
Background: There have been many algorithms and software programs implemented for the inference of multiple sequence alignments of protein and DNA sequences. The "true" ...
Paulo A. S. Nuin, Zhouzhi Wang, Elisabeth R. M. Ti...
COMPLIFE
2005
Springer
13 years 10 months ago
Protein Annotation by Secondary Structure Based Alignments (PASSTA)
Abstract. Most software tools in homology recognition on proteins answer only a few specific questions, often leaving not much room for the interpretation of the results. We devel...
Constantin Bannert, Jens Stoye
JCDL
2006
ACM
176views Education» more  JCDL 2006»
13 years 11 months ago
A hierarchical, HMM-based automatic evaluation of OCR accuracy for a digital library of books
A number of projects are creating searchable digital libraries of printed books. These include the Million Book Project, the Google Book project and similar efforts from Yahoo an...
Shaolei Feng, R. Manmatha
BIOCOMP
2008
13 years 6 months ago
GIPSCo: A Method for Comparison of Protein Structures Based on Geometric Invariants
Protein structure comparison is important for elucidation of evolutionary relationships, function and functionally important amino acid residues. We propose Geometric Invariant bas...
Sandeep Deshmukh, Aniket Dalal, Pramod Wangikar
BMCBI
2006
134views more  BMCBI 2006»
13 years 5 months ago
A statistical score for assessing the quality of multiple sequence alignments
Background: Multiple sequence alignment is the foundation of many important applications in bioinformatics that aim at detecting functionally important regions, predicting protein...
Virpi Ahola, Tero Aittokallio, Mauno Vihinen, Esa ...