211 search results - page 2 / 43 » Algorithms for Loosely Constrained Multiple Sequence Alignme... |
PPSN
2004
Springer
13 years 10 months ago
2004
Springer
Abstract. The multiple sequence alignment problem (MSA) can be reformulated as the problem of finding a maximum weight trace in an alignment graph, which is derived from all pairw...
BMCBI
2007
13 years 5 months ago
2007
Background: High quality multiple alignments are crucial in the transfer of annotation from one genome to another. Multiple alignment methods strive to achieve ever increasing lev...
BIOCOMP
2006
13 years 6 months ago
2006
Computation of multiple sequence alignments is one of the major open problems in computational molecular biology. The purpose of this study was to provide a new method, PAC (Progre...
GECCO
2008
Springer
13 years 6 months ago
2008
Springer
This paper introduces GLOCSA as a new scoring function to rate multiple sequence alignments. It is intended to be simple, considering the whole alignment at once and reflecting t...
GECCO
2003
Springer
13 years 10 months ago
2003
Springer
In this paper we present an approach that evolves the consensus sequence [25] for multiple sequence alignment (MSA) with genetic algorithm (GA). We have developed an encoding schem...