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» Algorithms on Compressed Strings and Arrays
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CSL
2003
Springer
13 years 10 months ago
Automata on Lempel-ziv Compressed Strings
Using the Lempel-Ziv-78 compression algorithm to compress a string yields a dictionary of substrings, i.e. an edge-labelled tree with an order-compatible enumeration, here called a...
Hans Leiß, Michel de Rougemont
STACS
2009
Springer
14 years 3 days ago
A Unified Algorithm for Accelerating Edit-Distance Computation via Text-Compression
The edit distance problem is a classical fundamental problem in computer science in general, and in combinatorial pattern matching in particular. The standard dynamic-programming s...
Danny Hermelin, Gad M. Landau, Shir Landau, Oren W...
ICALP
2007
Springer
13 years 9 months ago
In-Place Suffix Sorting
Given string T = T[1, . . . , n], the suffix sorting problem is to lexicographically sort the suffixes T[i, . . . , n] for all i. This problem is central to the construction of suf...
Gianni Franceschini, S. Muthukrishnan
IPPS
2006
IEEE
13 years 11 months ago
Implementation of a programmable array processor architecture for approximate string matching algorithms on FPGAs
Approximate string matching problem is a common and often repeated task in information retrieval and bioinformatics. This paper proposes a generic design of a programmable array p...
Panagiotis D. Michailidis, Konstantinos G. Margari...
CORR
2010
Springer
200views Education» more  CORR 2010»
13 years 5 months ago
Unified Compression-Based Acceleration of Edit-Distance Computation
The edit distance problem is a classical fundamental problem in computer science in general, and in combinatorial pattern matching in particular. The standard dynamic programming s...
Danny Hermelin, Gad M. Landau, Shir Landau, Oren W...