70 search results - page 1 / 14 » Alignment of RNA base pairing probability matrices |
BIOINFORMATICS
2004
13 years 5 months ago
2004
ICASSP
2008
IEEE
13 years 11 months ago
2008
IEEE
We propose an algorithm for estimating the common secondary structure, alignment, and posterior base pairing probabilities for two RNA sequences. A definition of structural align...
JCB
2000
13 years 5 months ago
2000
We present an implementation of McCaskill's algorithm for computing the base pair probabilities of an RNA molecule for massively parallel message passing architectures. The p...
ICASSP
2011
IEEE
12 years 9 months ago
2011
IEEE
TurboFold, an iterative algorithm for estimating the common secondary structures of multiple RNA homologs, is presented. The algorithm is motivated by and has structure and attrib...
BMCBI
2007
13 years 5 months ago
2007
Background: Joint alignment and secondary structure prediction of two RNA sequences can significantly improve the accuracy of the structural predictions. Methods addressing this p...