31 search results - page 3 / 7 » An On Off Lattice Approach to Protein Structure Prediction f... |
LPAR
2005
Springer
13 years 11 months ago
2005
Springer
Abstract. The paper describes the formalization and implementation of an efficient constraint programming framework operating on 3D crystal lattices. The framework is motivated an...
BMCBI
2006
13 years 6 months ago
2006
Background: Many biological processes involve the physical interaction between protein domains. Understanding these functional associations requires knowledge of the molecular str...
RECOMB
2004
Springer
14 years 6 months ago
2004
Springer
Finding recurring residue packing patterns, or spatial motifs, that characterize protein structural families is an important problem in bioinformatics. To this end, we apply a nov...
ICML
2004
IEEE
14 years 7 months ago
2004
IEEE
In this paper, we present a graphical model for protein secondary structure prediction. This model extends segmental semi-Markov models (SSMM) to exploit multiple sequence alignme...
BMCBI
2010
13 years 6 months ago
2010
Background: Protein alignments are an essential tool for many bioinformatics analyses. While sequence alignments are accurate for proteins of high sequence similarity, they become...