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JEI
2007
176views more  JEI 2007»
13 years 4 months ago
Adaptive techniques for microarray image analysis with related quality assessment
We propose novel techniques for microarray image analysis. In particular, we describe an overall pipeline able to solve the most common problems of microarray image analysis. We pr...
Sebastiano Battiato, Gianpiero di Blasi, Giovanni ...
BMCBI
2010
136views more  BMCBI 2010»
13 years 4 months ago
The IronChip evaluation package: a package of perl modules for robust analysis of custom microarrays
Background: Gene expression studies greatly contribute to our understanding of complex relationships in gene regulatory networks. However, the complexity of array design, producti...
Yevhen Vainshtein, Mayka Sanchez, Alvis Brazma, Ma...
BMCBI
2008
121views more  BMCBI 2008»
13 years 4 months ago
GeneTrailExpress: a web-based pipeline for the statistical evaluation of microarray experiments
Background: High-throughput methods that allow for measuring the expression of thousands of genes or proteins simultaneously have opened new avenues for studying biochemical proce...
Andreas Keller, Christina Backes, Maher Al-Awadhi,...
RSFDGRC
2005
Springer
192views Data Mining» more  RSFDGRC 2005»
13 years 10 months ago
An Open Source Microarray Data Analysis System with GUI: Quintet
We address Quintet, an R-based unified cDNA microarray data analysis system with GUI. Five principal categories of microarray data analysis have been coherently integrated in Quin...
Jun-kyoung Choe, Tae-Hoon Chung, Sunyong Park, Hwa...
ISMB
2000
13 years 6 months ago
Pattern Recognition of Genomic Features with Microarrays: Site Typing of Mycobacterium Tuberculosis Strains
Mycobacterium tuberculosis (M. tb.) strains differ in the number and locations of a transposon-like insertion sequence known as IS6110. Accurate detection of this sequence can be ...
Soumya Raychaudhuri, Joshua M. Stuart, Xuemin Liu,...