Sciweavers

56 search results - page 2 / 12
» Application of Graph-based Data Mining to Metabolic Pathways
Sort
View
BMCBI
2006
103views more  BMCBI 2006»
13 years 5 months ago
Meta-All: a system for managing metabolic pathway information
Background: Many attempts are being made to understand biological subjects at a systems level. A major resource for these approaches are biological databases, storing manifold inf...
Stephan Weise, Ivo Grosse, Christian Klukas, Dirk ...
BMCBI
2010
167views more  BMCBI 2010»
13 years 5 months ago
Bi-directional gene set enrichment and canonical correlation analysis identify key diet-sensitive pathways and biomarkers of met
Background: Currently, a number of bioinformatics methods are available to generate appropriate lists of genes from a microarray experiment. While these lists represent an accurat...
Melissa J. Morine, Jolene McMonagle, Sinead Toomey...
PAKDD
2007
ACM
183views Data Mining» more  PAKDD 2007»
13 years 11 months ago
Translation and Rotation Invariant Mining of Frequent Trajectories: Application to Protein Unfolding Pathways
We present a framework for mining frequent trajectories, which are translated and/or rotated with respect to one another. We then discuss a multiresolution methodology, based on th...
Alexander Andreopoulos, Bill Andreopoulos, Aijun A...
BMCBI
2006
172views more  BMCBI 2006»
13 years 5 months ago
BioWarehouse: a bioinformatics database warehouse toolkit
Background: This article addresses the problem of interoperation of heterogeneous bioinformatics databases. Results: We introduce BioWarehouse, an open source toolkit for construc...
Thomas J. Lee, Yannick Pouliot, Valerie Wagner, Pr...
CGF
2008
142views more  CGF 2008»
13 years 5 months ago
Visualizing Genome Expression and Regulatory Network Dynamics in Genomic and Metabolic Context
DNA microarrays are used to measure the expression levels of thousands of genes simultaneously. In a time series experiment, the gene expressions are measured as a function of tim...
Michel A. Westenberg, Sacha A. F. T. van Hijum, Os...