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» Approximating edit distance in near-linear time
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STOC
1998
ACM
190views Algorithms» more  STOC 1998»
13 years 9 months ago
Efficient Search for Approximate Nearest Neighbor in High Dimensional Spaces
We address the problem of designing data structures that allow efficient search for approximate nearest neighbors. More specifically, given a database consisting of a set of vecto...
Eyal Kushilevitz, Rafail Ostrovsky, Yuval Rabani
ISAAC
2003
Springer
133views Algorithms» more  ISAAC 2003»
13 years 10 months ago
The Intractability of Computing the Hamming Distance
Given a string x and a language L, the Hamming distance of x to L is the minimum Hamming distance of x to any string in L. The edit distance of a string to a language is analogous...
Bodo Manthey, Rüdiger Reischuk
ICPR
2002
IEEE
14 years 6 months ago
A Windowed Weighted Approach for Approximate Cyclic String Matching
A method for measuring dissimilarities between cyclic strings is introduced. It computes a weighted mean between two (lower and upper) bounds of the exact cyclic edit distance, wh...
Ramón Alberto Mollineda, Enrique Vidal, Fra...
CPM
2009
Springer
94views Combinatorics» more  CPM 2009»
13 years 12 months ago
Online Approximate Matching with Non-local Distances
Abstract. A black box method was recently given that solves the problem of online approximate matching for a class of problems whose distance functions can be classified as being ...
Raphaël Clifford, Benjamin Sach
BIBE
2005
IEEE
124views Bioinformatics» more  BIBE 2005»
13 years 11 months ago
Approximate Global Alignment of Sequences
We propose two novel dynamic programming (DP) methods that solve the the approximate bounded and unbounded global alignment problems for biological sequences. Our first method so...
Tamer Kahveci, Venkatakrishnan Ramaswamy, Han Tao,...