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» Artificial Chemistries and Metabolic Pathways
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JBI
2004
163views Bioinformatics» more  JBI 2004»
13 years 6 months ago
Artificial Chemistries and Metabolic Pathways
Metabolism can be regarded as a network of biochemical reactions, connected via their substrates and products. A metabolic pathway is thus a coordinated series of reactions, and i...
Liliana Félix, Francesc Rosselló, Ga...
CMSB
2007
Springer
13 years 11 months ago
Reconstructing Metabolic Pathways by Bidirectional Chemical Search
Abstract. One of the main challenges in systems biology is the establishment of the metabolome: a catalogue of the metabolites and biochemical reactions present in a specific orga...
Liliana Félix, Francesc Rosselló, Ga...
BIOWIRE
2007
Springer
13 years 8 months ago
An Artificial Chemistry for Networking
Chemical computing models have been proposed since the 1980ies for expressing concurrent computations in elegant ways for shared memory systems. In this paper we look at the distri...
Thomas Meyer, Lidia Yamamoto, Christian F. Tschudi...
ECAL
2003
Springer
13 years 10 months ago
Simulating Evolution's First Steps
We demonstrate a simple artificial chemistry environment in which two small evolutionary transitions from the simplest self-replicators to larger ones are observed. The replicator...
Tim J. Hutton
ECAL
2001
Springer
13 years 9 months ago
Stability of Metabolic and Balanced Organisations
We investigate the possible organisations emerging from an artificial chemistry (AC) of colliding molecules in a well stirred reactor. The molecules are generated from 7 basic comp...
Pietro Speroni di Fenizio, Wolfgang Banzhaf