126 search results - page 3 / 26 » Automated Alignment of RNA Sequences to Pseudoknotted Struct... |
APBC
2004
13 years 6 months ago
2004
Pseudoknots are widely occurring structural motifs in RNA. Pseudoknots have been shown to be functionally important in different RNAs which play regulatory, catalytic, or structur...
CPM
2008
Springer
13 years 7 months ago
2008
Springer
We present an algorithm for computing the edit distance of two RNA structures with arbitrary kinds of pseudoknots. A main benefit of the algorithm is that, despite the problem is N...
BMCBI
2004
13 years 5 months ago
2004
Background: The general problem of RNA secondary structure prediction under the widely used thermodynamic model is known to be NP-complete when the structures considered include a...
WABI
2010
Springer
13 years 3 months ago
2010
Springer
Background: Although many RNA molecules contain pseudoknots, computational prediction of pseudoknotted RNA structure is still in its infancy due to high running time and space con...
BIOCOMP
2006
13 years 6 months ago
2006
- In this study, a context-sensitive grammar is suggested to model various forms of RNA secondary structures, especially pseudoknots. Comparing with a conventional context-free gra...