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WABI
2010
Springer
128views Bioinformatics» more  WABI 2010»
13 years 4 months ago
Sparsification of RNA Structure Prediction Including Pseudoknots
Background: Although many RNA molecules contain pseudoknots, computational prediction of pseudoknotted RNA structure is still in its infancy due to high running time and space con...
Mathias Möhl, Raheleh Salari, Sebastian Will,...
ICPADS
1994
IEEE
13 years 10 months ago
Stochastic Modeling of Scaled Parallel Programs
Testingthe performance scalabilityof parallelprograms can be a time consuming task, involving many performance runs for different computer configurations, processor numbers, and p...
Allen D. Malony, Vassilis Mertsiotakis, Andreas Qu...
OOPSLA
2010
Springer
13 years 4 months ago
An input-centric paradigm for program dynamic optimizations
Accurately predicting program behaviors (e.g., locality, dependency, method calling frequency) is fundamental for program optimizations and runtime adaptations. Despite decades of...
Kai Tian, Yunlian Jiang, Eddy Z. Zhang, Xipeng She...
BMCBI
2005
118views more  BMCBI 2005»
13 years 6 months ago
Variation in structural location and amino acid conservation of functional sites in protein domain families
Background: The functional sites of a protein present important information for determining its cellular function and are fundamental in drug design. Accordingly, accurate methods...
Birgit Pils, Richard R. Copley, Jörg Schultz
STOC
2004
ACM
145views Algorithms» more  STOC 2004»
14 years 6 months ago
Using mixture models for collaborative filtering
A collaborative filtering system at an e-commerce site or similar service uses data about aggregate user behavior to make recommendations tailored to specific user interests. We d...
Jon M. Kleinberg, Mark Sandler