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BMCBI
2011
12 years 11 months ago
PheMaDB: A solution for storage, retrieval, and analysis of high throughput phenotype data
Background: OmniLog™ phenotype microarrays (PMs) have the capability to measure and compare the growth responses of biological samples upon exposure to hundreds of growth condit...
Wenling E. Chang, Keri Sarver, Brandon W. Higgs, T...
BIBM
2007
IEEE
132views Bioinformatics» more  BIBM 2007»
13 years 11 months ago
A Divide-and-Conquer Implementation of Three Sequence Alignment and Ancestor Inference
In this paper, we present an algorithm to simultaneously align three biological sequences with affine gap model and infer their common ancestral sequence. Our algorithm can be fu...
Feng Yue, Jijun Tang
POPL
2012
ACM
12 years 25 days ago
Playing in the grey area of proofs
Interpolation is an important technique in verification and static analysis of programs. In particular, interpolants extracted from proofs of various properties are used in invar...
Krystof Hoder, Laura Kovács, Andrei Voronko...
CIMAGING
2008
165views Hardware» more  CIMAGING 2008»
13 years 6 months ago
Multimodal unbiased image matching via mutual information
In the past decade, information theory has been studied extensively in computational imaging. In particular, image matching by maximizing mutual information has been shown to yiel...
Igor Yanovsky, Paul M. Thompson, Stanley Osher, Al...
BMCBI
2005
126views more  BMCBI 2005»
13 years 5 months ago
GANN: Genetic algorithm neural networks for the detection of conserved combinations of features in DNA
Background: The multitude of motif detection algorithms developed to date have largely focused on the detection of patterns in primary sequence. Since sequence-dependent DNA struc...
Robert G. Beiko, Robert L. Charlebois