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» Bayesian Shot Detection Using Structural Weighting
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ESANN
2004
13 years 7 months ago
Neural networks for data mining: constrains and open problems
When we talk about using neural networks for data mining we have in mind the original data mining scope and challenge. How did neural networks meet this challenge? Can we run neura...
Razvan Andonie, Boris Kovalerchuk
BMCBI
2010
202views more  BMCBI 2010»
13 years 6 months ago
NeMo: Network Module identification in Cytoscape
Background: As the size of the known human interactome grows, biologists increasingly rely on computational tools to identify patterns that represent protein complexes and pathway...
Corban G. Rivera, Rachit Vakil, Joel S. Bader
BIOINFORMATICS
2008
97views more  BIOINFORMATICS 2008»
13 years 6 months ago
An integrated system for studying residue coevolution in proteins
Residue coevolution has recently emerged as an important concept, especially in the context of protein structures. While a multitude of different functions for quantifying it have...
Kevin Y. Yip, Prianka Patel, Philip M. Kim, Donald...
BMCBI
2005
90views more  BMCBI 2005»
13 years 5 months ago
TMB-Hunt: An amino acid composition based method to screen proteomes for beta-barrel transmembrane proteins
Background: Beta-barrel transmembrane (bbtm) proteins are a functionally important and diverse group of proteins expressed in the outer membranes of bacteria (both gram negative a...
Andrew G. Garrow, Alison Agnew, David R. Westhead
BMCBI
2006
133views more  BMCBI 2006»
13 years 6 months ago
Choosing negative examples for the prediction of protein-protein interactions
The protein-protein interaction networks of even well-studied model organisms are sketchy at best, highlighting the continued need for computational methods to help direct experim...
Asa Ben-Hur, William Stafford Noble