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DNA
2004
Springer
168views Bioinformatics» more  DNA 2004»
13 years 10 months ago
Biomolecular Implementation of Computing Devices with Unbounded Memory
We propose a new way to implement (general) computing devices with unbounded memory. In particular, we show a procedure to implement automata with unbounded stack memory, push-down...
Matteo Cavaliere, Natasa Jonoska, Sivan Yogev, Ron...
DNA
2009
Springer
158views Bioinformatics» more  DNA 2009»
13 years 11 months ago
Design of a Biomolecular Device That Executes Process Algebra
Process algebras are widely used for defining the formal semantics of concurrent communicating processes. In process algebra, concurrent processes can be specified to execute di...
Urmi Majumder, John H. Reif
HPCA
2005
IEEE
14 years 5 months ago
Unbounded Transactional Memory
Hardware transactional memory should support unbounded transactions: transactions of arbitrary size and duration. We describe a hardware implementation of unbounded transactional ...
C. Scott Ananian, Krste Asanovic, Bradley C. Kuszm...
CORR
2010
Springer
141views Education» more  CORR 2010»
13 years 4 months ago
FIFO anomaly is unbounded
Abstract. Virtual memory of computers is usually implemented by demand paging. For some page replacement algorithms the number of page faults may increase as the number of page fra...
Peter Fornai, Antal Iványi
PPOPP
2006
ACM
13 years 10 months ago
Performance characterization of molecular dynamics techniques for biomolecular simulations
Large-scale simulations and computational modeling using molecular dynamics (MD) continues to make significant impacts in the field of biology. It is well known that simulations...
Sadaf R. Alam, Jeffrey S. Vetter, Pratul K. Agarwa...