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BIBE
2007
IEEE
151views Bioinformatics» more  BIBE 2007»
13 years 7 months ago
On the Effectiveness of Constraints Sets in Clustering Genes
—In this paper, we have modified a constrained clustering algorithm to perform exploratory analysis on gene expression data using prior knowledge presented in the form of constr...
Erliang Zeng, Chengyong Yang, Tao Li, Giri Narasim...
BMCBI
2006
131views more  BMCBI 2006»
13 years 5 months ago
Hybridization interactions between probesets in short oligo microarrays lead to spurious correlations
Background: Microarrays measure the binding of nucleotide sequences to a set of sequence specific probes. This information is combined with annotation specifying the relationship ...
Michal J. Okoniewski, Crispin J. Miller
BTW
2007
Springer
236views Database» more  BTW 2007»
13 years 9 months ago
A Classification of Schema Mappings and Analysis of Mapping Tools
: Schema mapping techniques for data exchange have become popular and useful tools both in research and industry. A schema mapping relates a source schema with a target schema via ...
Frank Legler, Felix Naumann
BMCBI
2006
166views more  BMCBI 2006»
13 years 5 months ago
bioNMF: a versatile tool for non-negative matrix factorization in biology
Background: In the Bioinformatics field, a great deal of interest has been given to Non-negative matrix factorization technique (NMF), due to its capability of providing new insig...
Alberto D. Pascual-Montano, Pedro Carmona-Saez, Mo...
BMCBI
2008
124views more  BMCBI 2008»
13 years 5 months ago
RPPAML/RIMS: A metadata format and an information management system for reverse phase protein arrays
Background: Reverse Phase Protein Arrays (RPPA) are convenient assay platforms to investigate the presence of biomarkers in tissue lysates. As with other high-throughput technolog...
Romesh Stanislaus, Mark Carey, Helena F. Deus, Kev...